Technical Reports
2010
- Formal/Numerical methods for identifiability. R. Choquet and D. J. Cole, UKC/SMSAS/10/016, SMSAS, University of Kent, UK
- Parameter Redundancy in Ring-Recovery Models. Cole, D.J., Morgan, B.J.T. and Catchpole, E.A., UKC/SMSAS/10/010, SMSAS, University of Kent, UK
- Closed form likelihood for age and time-dependent multi-state mark-recapture-recovery models. McCrea, R.S.University of Kent Technical Report UKC/SMSAS/10/017.
- Ecological habits, spatial behaviour and abundance estimates of the bottlenose dolphin, Tursiops truncatus, in the Pelagos Sanctuary MPA. Gnone, G., Bellingeri, M., Dhermain, F., Dupraz, F., Nuti, S., Bedocchi, D., Moulins, A., Rosso, M., Wurtz, M., McCrea, R.S., Azzelino, A., Airoldi, S., Portunato, N., Laran, S., David, L., Di Meglio, N., Bonelli, P., Montesi, G., Trucchi, R. and Fossa, F. University of Kent Technical Report UKC/SMSAS/10/008.
- Age-dependent mixture models for recovery data on animals marked at unknown age. McCrea, R.S., Morgan, B.J.T. and Cole, D.J. University of Kent Technical Report UKC/SMSAS/10/020.
- A generalised matrix form likelihood for mark-recapture-recovery data. King, R. and McCrea, R.S., University of Kent Technical Report UKC/SMSAS/10/021.
2009
- Integrated population modelling. Besbeas, P. and Morgan, B.J.T. (2009) UKC/IMS/09/027, IMSAS, University of Kent, UK
- Determining parameter redundancy of multi-state mark-recapture models for Sea Birds. Cole, D.J. (2009) UKC/IMS/09/026, IMSAS, University of Kent, UK
- Multi-site integrated population modelling. Mccrea, R.S., Morgan, B.J.T., Gimenez, O., Besbeas, P., Bregnballe, T., Henaux, V. and Lebreton, J.-D. (2009) UKC/IMS/09/023, IMSAS, University of Kent, UK
- Estimating survival and transition rates from aggregate sightings of animals. Viallefont, A., Besbeas, P. and Morgan, B.J.T. (2009) UKC/IMS/09/022, IMSAS, University of Kent, UK
- A note on the identifiability of certain latent class models. Cole, D.J. (2009) UKC/IMS/09/019, IMSAS, University of Kent, UK
- Continuous covariates in mark-recapture-recovery analysis: A comparison of methods. Bonner, S.J., Morgan, B.J.T. and King, R. (2009) UKC/IMS/09/016, IMSAS, University of Kent, UK
- Determining the parametric structure of non-linear models. Cole, D.J. and Morgan, B.J.T. (2009) UKC/IMS/09/005, IMSAS, University of Kent, UK
- A note on determining parameter redundancy in age-dependent tag return models for estimating fishing mortality, natural mortality and selectivity. Cole, D.J. and Morgan, B.J.T. (2009) UKC/IMS/09/003, IMSAS, University of Kent, UK
2008
- Simultaneous estimation of seasonal trends, spatial dispersion and population size for closely monitored species. Mazzetta, C., Morgan, B.J.T. and Coulson, T. (2008) UKC/IMS/08/032, IMSAS, University of Kent, UK
- Final report on BBSRC project: linking ecological and evolutionary dynamics. Morgan, B.J.T. and Coulson, T. Named collaborators: Catchpole, E.A., Festa-Bianchet, M., King, R. and Brooks, S.P. (2008) UKC/IMS/08/030, IMSAS, University of Kent, UK
- Capture-recapture smooth estimation of survival probabilities in ageing animal populations. Viallefont, A. (2008) UKC/IMS/08/029, IMSAS, University of Kent, UK
- Dynamics of a declining amphibian metapopulation: survival, dispersal and the impact of climate. Griffiths, R.A., Sewell, D. and Borysiewicz, R.S. (2008) UKC/IMS/08/026, IMSAS, University of Kent, UK
- Parameter redundancy and identifiability. Cole, D.J. and Morgan, B.J.T. (2008) UKC/IMS/08/022, IMSAS, University of Kent, UK
- Predicting the spatio-temporal patterns of tiger and their prey across a primary-disturbed forest landscape in Sumatra. Linkie, M., Borysiewicz, R.S., Dinata, Y., Nugroho, A., Achmad Haidir, I., Ridout, M.S., Leader-Williams, N. and Morgan, B.J.T. (2008) UKC/IMS/08/021, IMSAS, University of Kent, UK
- Estimating overlap of daily activity patterns from camera trap data. Ridout, M.S. and Linkie, M. (2008) UKC/IMS/08/016, IMSAS, University of Kent, UK
- Estimating the distribution of demersal fishing effort from VMS data using hidden Markov models. Borchers, D L. and D G. Reid (2008) Technical Report 2008-1, CREEM, University of St Andrews, UK
2007
- Incorporating model uncertainty into the sequential importance sampling framework using a model averaging approach, or trans-dimensional sequential importance sampling. Lynam, C., King R.,Thomas L., and Buckland, S.T. (2007) Technical Report 2007-6, CREEM, University of St Andrews, UK
- Accommodating availability bias on line transect surveys using hidden Markov models. Borchers, D.L. and Samarra, F.I.P. (2007) Technical Report 2007-5, CREEM, University of St Andrews, UK
- Investigation of towed hydrophone monitoring power for harbour porpoise on the SCANS-II survey. Borchers, D.L. and Burt, M.L. (2007) Technical report 2007- 4, CREEM, University of St Andrews, UK
- Methods for estimating sperm whale abundance from passive acoustic line transect surveys. Borchers, D.L., Brewer, C. and Matthews, J. (2007) Technical report 2007-3, CREEM, University of St Andrews, UK
- Point and interval estimates of abundance using multiple covariate distance sampling: An example using great bustards. Rexstad, E. (2007) Technical report 2007-2, CREEM, University of St Andrews, UK
- Non-uniform coverage estimators for distance sampling. Rexstad, E. (2007) Technical report 2007-1, CREEM, University of St Andrews, UK
- A threshold model for heron productivity. Besbeas, P. and Morgan, B.J.T. (2007) UKC/IMS/07/016, IMSAS, University of Kent, UK
- Determining the population biology of perennial plants: the use of symbolic algebra to provide explicit perturbation analysis. Miller, D., Carey, P.D., Morgan, B.J.T., Ridout, M.S. and Rothery, P. (2007) UKC/IMS/07/013, IMSAS, University of Kent, UK
- Software for fitting capture heterogeneity models to estimate the size of a closed population. Ridout, M.S. (2007) UKC/IMS/07/011, IMSAS, University of Kent, UK
- Detecting parameter redundancy in covariate models. Cole, D.J. and Morgan, B.J.T. (2007) UKC/IMS/07/007, IMSAS, University of Kent, UK
- Identifying and diagnosing population declines: a Bayesian assessment of lapwings in the UK. King, R., Brooks, S.P., Mazzetta, C., Freeman, S.N. and Morgan, B.J.T. (2007) UKC/IMS/07/005, IMSAS, University of Kent, UK
- Spatial modeling of survival using mark-recapture data. Grosbois, V., Harris, M.P., Anker-Nilssen, T., McCleery, R.H., Shaw, D.N., Morgan, B.J.T. and Gimenez, O. (2007) UKC/IMS/07/004, IMSAS, University of Kent, UK
- An integrated analysis of multisite recruitment, mark-recapture-recovery and multisite census data. Borysiewicz, R.S., Gimenez, O., Hénaux, V., Bregnballe, T., Lebreton, J.-D. and Morgan, B.J.T. (2007) UKC/IMS/07/002, IMSAS, University of Kent, UK
- Completing the ecological jigsaw. Besbeas, P., Borysiewicz, R.S. and Morgan, B.J.T. (2007) UKC/IMS/07/001, IMSAS, University of Kent, UK
2006
- Estimating N: a robust approach to recapture heterogeneity. Morgan, B.J.T. and Ridout, M.S. (2006) UKC/IMS/06/031, IMSAS, University of Kent, UK
- Weak identifiability in models for mark-recapture-recovery data. Gimenez, O., Morgan, B.J.T. and Brooks, S.P. (2006) UKC/IMS/06/030, IMSAS, University of Kent, UK
- Negative score test statistic. Morgan, B.J.T., Palmer, K.J. and Ridout, M.S. (2006) UKC/IMS/06/029, IMSAS, University of Kent, UK
- Kalman filter initialization for modelling population dynamics. Besbeas, P. and Morgan, B.J.T (2006) UKC/IMS/06/025, IMSAS, University of Kent, UK
- Estimating the phenotypic costs of reproduction using reproductive values. Tavecchia, G., Morgan, B.J.T., Catchpole, E.A., Pemberton, J., Caswell, H. and Coulson, T. (2006) UKC/IMS/06/19, IMSAS, University of Kent, UK
- The influence of spatial, temporal and individual factors on the home range area of female red deer. Moyes, K., Coulson, T., Morgan, B.J.T., Donald, A., Morris, S.J., Guinness, F.E. and Clutton-Brock, T.H. (2006) UKC/IMS/06/16, IMSAS, University of Kent, UK
- Estimating population size and hidden demographic parameters with state-space modeling. Tavecchia, G., Besbeas, P., Coulson, T., Clutton-Brock, T.H. and Morgan, B.J.T. (2006) UKC/IMS/06/15, IMSAS, University of Kent, UK
- Population growth in Greater Snow geese: a new modelling approach integrating demographic and census information. Gauthier, G., Besbeas, P., Lebreton, J.-D. and Morgan, B.J.T. (2006) UKC/IMS/06/12, IMSAS, University of Kent, UK
- New methods for including covariates in models for the survival of wild animals. Morgan, B.J.T. (2006) UKC/IMS/06/10, IMSAS, University of Kent, UK
- A new mixture model for recapture heterogeneity. Morgan, B.J.T. and Ridout, M.S. (2006) UKC/IMS/06/06, IMSAS, University of Kent, UK